Dr Alan Garny

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Software Developer

Selected publications and creative works (Research Outputs)

As of 29 October 2020 there will be no automatic updating of 'selected publications and creative works' from Research Outputs. Please continue to keep your Research Outputs profile up to date.
  • Clerx, M., Cooling, M. T., Cooper, J., Garny, A., Moyle, K., Nickerson, D. P., ... Sorby, H. (2020). CellML 2.0. Journal of integrative bioinformatics, 17 (2-3).10.1515/jib-2020-0021
    Other University of Auckland co-authors: David Nickerson, Poul Nielsen, Hugh Sorby
  • Neal, M. L., König M, Nickerson, D., Mısırlı G, Kalbasi, R., Dräger A, ... Cook, D. L. (2019). Harmonizing semantic annotations for computational models in biology. Briefings in bioinformatics, 20 (2), 540-550. 10.1093/bib/bby087
    Other University of Auckland co-authors: David Nickerson, Koray Atalag
  • de Boer, T. P., van der Werf, S., Hennekam, B., Nickerson, D. P., Garny, A., Gerbrands, M., ... van Rijen, H. V. M. (2017). eSolv, a CellML-based simulation front-end for online teaching. Advances in physiology education, 41 (3), 425-427. 10.1152/advan.00127.2016
    URL: http://hdl.handle.net/2292/44113
    Other University of Auckland co-authors: David Nickerson
  • Hucka, M., Nickerson, D. P., Bader, G. D., Bergmann, F. T., Cooper, J., Demir, E., ... Schreiber, F. (2015). Promoting coordinated development of community-based information standards for modeling in biology: The COMBINE initiative. Front Bioeng Biotechnol, 310.3389/fbioe.2015.00019
    Other University of Auckland co-authors: David Nickerson
  • Garny, A., & Hunter, P. J. (2015). OpenCOR: A modular and interoperable approach to computational biology. Frontiers in Physiology, 610.3389/fphys.2015.00026
    Other University of Auckland co-authors: Peter Hunter
  • Nickerson, D. P., Garny, A., Nielsen, P. M. F., & Hunter, P. J. (2013). Standards and tools supporting collaborative development of the virtual physiological human. Engineering in Medicine and Biology Society (EMBC), 2013 35th Annual International Conference of the IEEE, 5541-5544. Osaka. 10.1109/EMBC.2013.6610805
    Other University of Auckland co-authors: Peter Hunter, Poul Nielsen, David Nickerson
  • Hunter, P., Bradley, C., Britten, R., Brooks, D., Carotenuto, L., Christie, R., ... Little, C. (2012). The VPH-Physiome project: Standards, tools and databases for multi-scale physiological modelling. In D. Ambrosi, A. Quarteroni, G. Rozza (Eds.) Modelling of physiological flows (pp. 205-250). Milan, Italy: Springer Milan. 10.1007/978-88-470-1935-5_8
    Other University of Auckland co-authors: Tommy Yu, Peter Hunter, Poul Nielsen, Christopher Bradley, David Nickerson, Alistair Young, Richard Christie, David Brooks
  • Niederer, S. A., Kerfoot, E., Benson, A. P., Bernabeu, M. O., Bernus, O., Bradley, C., ... Garny, A. (2011). Verification of cardiac tissue electrophysiology simulators using an N-version benchmark. Philosophical transactions. Series A, Mathematical, physical, and engineering sciences, 369 (1954), 4331-4351. 10.1098/rsta.2011.0139
    Other University of Auckland co-authors: Christopher Bradley, Nic Smith

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UNISERVICES HOUSE - Bldg 439
Level 6, Room 601
70 SYMONDS ST
AUCKLAND 1010
New Zealand